Table 1 Summary of simulation groups
From: Automatic block-wise genotype-phenotype association detection based on hidden Markov model
Group | Model | Sample size | Site strengths | MAFs | Noise terms | Impurity |
|---|---|---|---|---|---|---|
1 | HMM | 1000,1000 | HMM | – | – | – |
2 | Block | 1000,1000 | MAF-dependent | Mixed | No | 0 |
3 | Block | 1000,1000 | Uniform | Mixed | Yes | 0.25 |
4 | Block | 1000,1000 | Uniform | Mixed | Yes | 0.5 |
5 | Block | 1500,500 | Uniform | Mixed | No | 0 |
6 | Block | 1500,500 | Uniform | Mixed | Yes | 0.25 |
7 | Block | 150,150 | Uniform | Mixed | No | 0 |
8 | Block | 200,100 | Uniform | Mixed | No | 0 |
9 | Block | 2500,2500 | Uniform | Low | No | 0 |