Table 3 Overview of benchmark microarray datasets
Dataset | Cancer type | No. of total genes | No. of total samples | Class (no. of samples) | Classification type |
|---|---|---|---|---|---|
Breast | Breast cancer | 24,188 | 97 | Relapse (46) Non-relapse (51) | Cancer subtypes |
CNS | Central nervous system embryonal tumor | 7129 | 60 | Survivors (39) Failures (21) | Prognosis |
Colon | Colon cancer | 2000 | 62 | Tumor (40) Normal (22) | Cancer and Normal |
Leukemia | Human acute leukemias | 7129 | 72 | ALL (47) AML (25) | Cancer subtypes |
Lung | Lung cancer | 12,600 | 203 | ADEN (139) SCLC (6) SQUA (21) COID (20) Normal (17) | Cancer subtypes and normal |
Lymphoma | Adult lymphoid malignancies | 1230 | 66 | DLBCL (46) FL (9) CLL (11) | Cancer subtypes |
MLL | Mixed-lineage leukemia | 12,582 | 72 | ALL (24) MLL (20) AML (28) | Cancer subtypes |
SRBCT | Small, round blue cell tumors of childhood | 2308 | 83 | EWS (29) BL (11) NB (18) RMS (25) | Cancer subtypes |