Table 5 The spatial distribution profile of RBPs unique for RNA types Circular and lncRNA
RNA type with which RBPs bound | Databases providing Information of RBPs related to RNA types | Sub cellular distribution of RBPs (in %) obtained from UniProtKB database against RBPs as queries | |||
|---|---|---|---|---|---|
Cytosol only | nucleus only | Both nucleus and cytosol | Secreted | ||
Circular RNA only | CircInteractome | 26.90 ± 3.10 | 19.29 ± 9.29 | 53.81 ± 6.19 | 0 ± 0 |
lncRNA only | starBase & POSTAR | 10 ± 10 | 51.88 ± 8.13 | 28.85 ± 8.85 | 9.38 ± 9.38 |
Both lncRNA and circular RNA | CircInteractome, starBase & POSTAR | 18.60 ± 3.48 | 22.41 ± 9.36 | 58.99 ± 5.88 | 0 ± 0 |