Table 3 Runtime and RAM of construction kinship matrix based on pedigree in PyAGH and Nadiv
From: PyAGH: a python package to fast construct kinship matrices based on different levels of omic data
Number of records | PyAGH | Nadiv |
|---|---|---|
10,000 | 3 s (0.3 GB) | 2 s (0.3 GB) |
20,000 | 32 s (1.5 GB) | 23 s (1.6 GB) |
50,000 | 2min8s (11.9 GB) | 1min47s (16.4 GB) |
100,000 | 13min35s (100.6 GB) | – |