Table 9 Comparison of position encoding with NetsurfP-2.0 DSSP8 dataset
From: AttSec: protein secondary structure prediction by capturing local patterns from attention map
Position encoding | CASP12 | NEW364 | CB513 | TS115 |
|---|---|---|---|---|
RPE (this work) | 70.6 | 75.6 | 75.2 | 78.5 |
No | 70.6 | 75.5 | 75.2 | 78.3 |
APE | 67.6 | 73.0 | 70.3 | 75.6 |
RPE + APE | 68.0 | 73.1 | 70.6 | 75.8 |