Table 3 Top ranked features found from RF and SVM models in the RFE analyses
From: BaPreS: a software tool for predicting bacteriocins using an optimal set of features
Feature rank | Feature for RFE-MDG-RF | Feature for RFE-MDG-SVM | Feature for RFE-t-test-RF | Feature for RFE-t-test-SVM |
|---|---|---|---|---|
1 | Distribution (first residue) for hydrophobicity (group 3) | PseAAC for the amino acid Leucine (L) | Distribution (first residue) for charge (group 2) | PseAAC for the amino acid Leucine (L) |
2 | Distribution (first residue) for secondary structure (group 1) | PseAAC for the amino acid Arginine (R) | Distribution (first residue) for hydrophobicity (group 3) | PseAAC for the amino acid Arginine (R) |
3 | Distribution (first residue) for charge (group 2) | Distribution (first residue) for hydrophobicity (group 3) | Distribution (first residue) for solvent accessibility (group 3) | Distribution (first residue) for hydrophobicity (group 3) |
4 | Distribution (first residue) for solvent accessibility (group 3) | Distribution (first residue) for secondary structure (group 1) | Distribution (first residue) for secondary structure (group 1) | Distribution (first residue) for secondary structure (group 1) |
5 | Distribution (first residue) for normalized van der Waals Volume (group 3) | Distribution (first residue) for normalized van der Waals Volume (group 3) | Distribution (first residue) for normalized van der Waals Volume (group 3) | Distribution (first residue) for normalized van der Waals Volume (group 3) |