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Fig. 2 | BMC Bioinformatics

Fig. 2

From: HISS: Snakemake-based workflows for performing SMRT-RenSeq assembly, AgRenSeq and dRenSeq for the discovery of novel plant disease resistance genes

Fig. 2

Output plots produced by the Ag-RenSeq snakemake workflow. A Dot plot of the analysed contigs in the Ag-RenSeq workflow. Each contig in the assembly is arranged on the x-axis, with k-mers plotted on the y-axis. The size of the dot represents the number of k-mers. Contigs with k-mers above a threshold association score of 26 are highlighted in red. B A plot of NLRs by chromosomal location based on the DM reference assembly. The grey bars represent the number of NLRs per 1000 kb. The red dot represents the location of contigs scored as positive by the association genetics following a BLAST analysis

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BMC Bioinformatics

ISSN: 1471-2105

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