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Fig. 4 | BMC Bioinformatics

Fig. 4

From: Empowering biologists to decode omics data: the Genekitr R package and web server

Fig. 4

Various types of plots offered by the plot module. a 13 plotting types of Over-Representation Analysis (ORA) of gene enrichment, including (i) dot plot, (ii) bar chart, (iii) lollipop plot, (iv) bubble graph, (v) gene-pathway heatmap, (vi) gene-pathway chord graph, (vii) UpsetR interaction plot, (viii) enriched terms network, (ix) enriched term treemap, (x) wordcloud chart, (xi) enriched terms heatmap, (xii) enriched terms tangram and (xiii) WEGO plot b 5 plotting types of Gene Set Enrichment Analysis (GSEA), containing (i) classic GSEA plot, (ii) enriched terms volcano plot, (iii) ridge plot, (iv) two-side bar graph and (v) table chart. c the Venn plot, which can be used to analyze group interactions. d the volcano plot, which can be used in differential gene expression analysis

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