Table 1 Confusion Matrix comparing clustering results with FACS labels
From: The Poisson distribution model fits UMI-based single-cell RNA-sequencing data
FACS | Seurat | ||||||||
|---|---|---|---|---|---|---|---|---|---|
s0 | s1 | s2 | s3 | s4 | s5 | s6 | s7 | s8 | |
B | 0 | 0 | 0 | 0 | 418 | 0 | 0 | 81 | 0 |
Monocytes | 1 | 5 | 1 | 547 | 2 | 0 | 0 | 3 | 41 |
NK | 7 | 6 | 585 | 0 | 1 | 0 | 1 | 0 | 0 |
T helper | 198 | 180 | 2 | 0 | 0 | 0 | 19 | 0 | 1 |
T memory | 59 | 394 | 0 | 0 | 0 | 0 | 47 | 0 | 0 |
Naive Cytotoxic | 26 | 4 | 0 | 0 | 1 | 367 | 0 | 0 | 0 |
T naive | 472 | 19 | 1 | 0 | 1 | 2 | 3 | 1 | 0 |
T regulatory | 120 | 230 | 0 | 0 | 0 | 1 | 147 | 0 | 0 |
FACS | Hclust-Departure | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
h1 | h2 | h3 | h4 | h5 | h6 | h7 | h8 | h9 | h10 | h11 | h12 | h13 | h14 | |
B | 417 | 34 | 48 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Monocytes | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 7 | 0 | 0 | 3 | 1 | 558 | 30 |
NK | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 5 | 0 | 3 | 0 | 589 | 0 | 0 |
T helper | 0 | 0 | 0 | 214 | 12 | 103 | 16 | 52 | 1 | 0 | 0 | 1 | 0 | 1 |
T memory | 0 | 0 | 0 | 80 | 11 | 108 | 257 | 28 | 14 | 1 | 0 | 1 | 0 | 0 |
Naive Cytotoxic | 1 | 0 | 0 | 135 | 240 | 11 | 7 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
T regulatory | 0 | 0 | 0 | 164 | 4 | 175 | 17 | 127 | 8 | 0 | 0 | 3 | 0 | 0 |