Fig. 1
From: MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads
Outline of the MitoHiFi workflow. Flow diagram of MitoHiFi processes. The inputs to MitoHiFi are a closely-related reference mitochondrial genome with either (i) raw Pacbio HiFi reads (−r parameter), or (ii) previously assembled contigs (−c parameter). Example of outputs generated by MitoHiFi. A summary of the outputs generated by the pipeline, including the contigs_stats.tsv table summarising the metrics for the assembly, output sequence and annotation files, and graphical representations of coverage and annotation