Table 1 Precision, recall and F1 values calculated from running xenoGI on the output of genome evolution simulations
From: xenoGI 3: using the DTLOR model to reconstruct the evolution of gene families in clades of microbes
| Â | Precision | Recall | F1 |
|---|---|---|---|
Family gene content | 0.48 ± 0.02 | 0.99 ± 0.01 | 0.64 ± 0.02 |
Origin | 0.47 ± 0.02 | 0.97 ± 0.01 | 0.63 ± 0.02 |
Duplication | 0.63 ± 0.03 | 0.9 ± 0.02 | 0.74 ± 0.03 |
Horizontal transfer within tree | 0.6 ± 0.02 | 0.31 ± 0.03 | 0.4 ± 0.02 |
Loss | 0.79 ± 0.02 | 0.62 ± 0.02 | 0.69 ± 0.01 |
Rearrangement | 0.1 ± 0.02 | 0.33 ± 0.06 | 0.15 ± 0.03 |