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Fig. 3 | BMC Bioinformatics

Fig. 3

From: ROGUE: an R Shiny app for RNA sequencing analysis and biomarker discovery

Fig. 3

Biomarker Discovery among CD4+ T cells, CD8+ T cells, and NK cells. A The Biomarker tool shows genes with high expression in one cell type and very low expression in the other cell types, suggesting that they may be potential biomarkers. B Heatmap showing relative expression values of the potential biomarkers’ gene expression for CD4+ T cell, CD8+ T cell, and NK cell groups. C 2-dimensional t-SNE plot of CD4+ T cells, CD8+ T cells, and NK cells from healthy controls using the identified potential biomarkers. D 2-dimensional t-SNE plot of CD4+ T cells, CD8+ T cells, and NK cells from both healthy and diseased groups using the identified potential biomarkers. E 3-dimensional t-SNE plot using the identified potential biomarkers emphasizes separation between clusters

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