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Table 1 Feature comparison between OGRE and eight similar tools

From: OGRE: calculate, visualize, and analyze overlap between genomic input regions and public annotations

Tool

Multiple input regions

Included annotations

Local genomic visualization

CGI

TFBS

Promoter

INSECT [29]

Ciiider [30]

ConTra v3 [31]

regioneR [32]

iProEP [33]

annotatr [34]

Goldmine [35]

GaussianCpG [36]

OGRE