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Table 5 Time in s for calculation of several distances/dissimilarities in large data sets

From: Scellpam: an R package/C++ library to perform parallel partitioning around medoids on scRNAseq data sets

 

Number of

     

Data set

Instances

\(L_1\)

\(L_2\)

Pearson

Cosine

Weighted Euc.

Wang

71,032

324.40

318.53

228.22

285.77

316.04

Garcia

100,307

772.94

761.19

459.19

665.20

753.25

FMA

106,574

165.92

168.05

155.05

162.09

166.67

Fonseca

118,144

663.12

654.61

585.62

534.70

654.17

Merge

289,483

5434.67

5363.10

3777.32

4647.69

5311.57

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BMC Bioinformatics

ISSN: 1471-2105

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