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Table 10 The effect of pLDDT on the experimental results of our GraphIdn model

From: Identification of plant vacuole proteins by using graph neural network and contact maps

PLDDT

Acc (%)

Sn (%)

Sp (%)

MCC

ROC-AUC

 > 70

85.47

93.22

77.59

0.718

0.930

 < 70

80.65

86.66

75.00

0.619

0.913