Skip to main content

Table 2 Binding energies for ligands versus native membrane proteins and their water-soluble QTY variants

From: CrMP-Sol database: classification, bioinformatic analyses and comparison of cancer-related membrane proteins and their water-soluble variant designs

Protein name

Ligand

Binding energy (kcal/mol)

Native

Water-soluble

MGAT3

Diacylglycerol (DAG)

− 6.8 ± 0.5

− 6.6 ± 0.3

2-Monoacylglycerol (2-MAG)

− 6.6 ± 0.5

− 6.1 ± 0.2

Oleoyl-CoA

− 7.9 ± 0.3

− 7.8 ± 0.2

GPR35

cGMP

− 8.1 ± 0.0

− 7.6 ± 0.0

Kynurenic acid

− 6.6 ± 0.0

− 6.5 ± 0.0

Lysophosphatidic acid

− 6.5 ± 0.2

− 6.0 ± 0.1

Pamoic acid

− 9.9 ± 0.0

− 7.9 ± 0.1

Zaprinast

− 7.5 ± 0.1

− 6.8 ± 0.1

GPR37

Neuroprotection D1

− 6.3 ± 0.3

− 5.9 ± 0.2

SLC10A1

Bile acid

− 8.0 ± 0.0

− 6.8 ± 0.2

Estrone sulfate

− 8.3 ± 0.0

− 7.7 ± 0.0

Glyco-chenodeoxycholic acid (GCDC)

− 7.7 ± 0.2

− 7.9 ± 0.1

Taurocholate

− 7.9 ± 0.0

− 7.4 ± 0.1

NPC1L1

Cholesterol

− 7.3 ± 0.1

− 6.8 ± 0.3