From: G-Aligner: a graph-based feature alignment method for untargeted LC–MS-based metabolomics
TP | FP | TN | FN | P | R | F | F_ACC | A_ACC | |
---|---|---|---|---|---|---|---|---|---|
MZmine2 RANSAC | 5751 | 106 | 2398 | 25 | 0.982 | 0.996 | 0.989 | 0.984 | 0.768 |
Local bipartite | 5719 | 58 | 2448 | 55 | 0.990 | 0.990 | 0.990 | 0.986 | 0.845 |
G-Aligner VLSNS_MSR | 5744 | 67 | 2435 | 34 | 0.988 | 0.994 | 0.991 | 0.988 | 0.850 |
G-Aligner VLSNS_MSG | 5758 | 66 | 2434 | 22 | 0.989 | 0.996 | 0.992 | 0.989 | 0.845 |
OpenMS QT | 3916 | 139 | 4182 | 43 | 0.966 | 0.989 | 0.977 | 0.978 | 0.715 |
Local bipartite | 3933 | 32 | 4277 | 38 | 0.992 | 0.990 | 0.991 | 0.992 | 0.894 |
G-Aligner VLSNS_MSR | 3961 | 34 | 4275 | 10 | 0.991 | 0.997 | 0.994 | 0.995 | 0.899 |
G-Aligner VLSNS_MSG | 3966 | 35 | 4275 | 4 | 0.991 | 0.999 | 0.995 | 0.995 | 0.899 |
XCMS Group | 5786 | 386 | 1671 | 437 | 0.937 | 0.930 | 0.934 | 0.901 | 0.676 |
XCMS OBI-Warp | 5756 | 437 | 1671 | 416 | 0.929 | 0.933 | 0.931 | 0.897 | 0.652 |
Local bipartite | 6425 | 37 | 1807 | 11 | 0.994 | 0.998 | 0.996 | 0.994 | 0.923 |
G-Aligner VLSNS_MSR | 6425 | 38 | 1807 | 10 | 0.994 | 0.998 | 0.996 | 0.994 | 0.918 |
G-Aligner VLSNS_MSG | 6431 | 37 | 1807 | 5 | 0.994 | 0.999 | 0.997 | 0.995 | 0.923 |