From: SeQual-Stream: approaching stream processing to quality control of NGS datasets
Hardware | ||
CPU Model | 2 × Intel Xeon Silver 4216 Cascade Lake-SP | |
CPU Speed/Turbo | 2.1 GHz/3.2 GHz | |
#Cores per node | 32 | |
#Threads per node | 64 | |
Cache L1/L2/L3 | 32 KiB/1 MiB/22 MiB | |
Memory | 256 GiB DDR4 2933 MHhz | |
Disks | 1 × HDD 2 TiB SATA3 7.2K rpm | |
1 × SSD 240 GiB SATA3 | ||
Network | InfiniBand FDR | |
Software | ||
OS Version | CentOS Linux release 7.9.2009 | |
Kernel | 5.4.233-1 | |
Java | OpenJDK 1.8.0_372 | |
Spark | Version | 3.1.1 |
Executors per node | 1 | |
Executor heap size | 225 GiB | |
Executor cores | 32 | |
Hadoop | Version | 2.10.1 |
HDFS | Block size | 128 MiB |
Replication factor | 3 |