Fig. 4
From: scInterpreter: a knowledge-regularized generative model for interpretably integrating scRNA-seq data
a we visualized the results from raw data and scInterpreter on PBMC dataset with UMAP. Cells are colored by the batch (the first row) and cell type (the second row). b plots of cells in 2 dimension of Immune and Cell differentiation-related pathway. c we visualized the integration results from scInterpreter. Cells are colored by cell type. Left is based on Immune pathway and right is based on Cell differentiation pathway. d UMAP plots of Immune pathway expression in cells. e. Dot plot of Immune pathway expression in different cell types