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Table 3 PhyloSophos mapping status for species-level scientific names (n = 282,008) with homonymic generic epithets collected from four taxonomic reference databases

From: PhyloSophos: a high-throughput scientific name mapping algorithm augmented with explicit consideration of taxonomic science, and its application on natural product (NP) occurrence database processing

Scientific name mapping status

COL

EOL

GBIF

NCBI

Exact mapping

184,895

168,936

223,194

101,515

(raw & simple correction)

183,541

162,960

221,540

97,228

(recursive mapping)

485

5,593

64

4,235

(multiple taxa linked)

860

374

1,580

49

Nearest mapping

91,035

106,936

54,145

175,311

(genus level)

88,204

101,426

53,095

158,474

(higher taxonomic level)

2,831

5,510

1,050

16,837

Partial mapping for strain names

4,454

4,455

4,454

4,522

Exceptions

128

126

133

141

Unmapped

1,496

1,555

82

519