Fig. 2From: PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq dataExample output from the PhytoPipe workflow. RNA-seq data from two apple samples (NCBI BioProject accession: PRJNA562540 [72]) processed by PhytoPipe show: A an HTML report showing results from different methods; B a MultiQC report for samples read quality; C a read mapping graph for a virus; D a Krona pie graph showing the taxonomic compositionBack to article page