primerJinn: a tool for rationally designing multiplex PCR primer sets for amplicon sequencing and performing in silico PCR

Table 1 Genomic targets for primerJinn multiplex design of drug resistance-conferring regions on M. tuberculosis H37Rv (NC_000962.3)

Gene	Drug	Genomic position start	Genomic position end
gyrB	Fluoroquinolones	6578	7250
fgd1	Delamanid	490,900	491,416
rpoB	Rifampicin	761,007	761,277
rv0678	Bedaquiline	778,990	779,488
fbiC	Linezolid	1,303,831	1,303,911
atpE	Bedaquiline	1,461,045	1,461,291
inhA	Isoniazid	1,674,182	1,674,222
katG	Isoniazid	2,154,831	2,154,873
pncA	Pyrazinamide	2,288,681	2,289,242

ISSN: 1471-2105