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Fig. 3 | BMC Bioinformatics

Fig. 3

From: TCGAplot: an R package for integrative pan-cancer analysis and visualization of TCGA multi-omics data

Fig. 3

Correlation between gene expression and TMB, and MSI. a Correlation between expression of KLF7 and TMB with the function “gene_TMB_radar("KLF7")”. KLF7 was negatively correlated with TMB in CHOL, COAD, ESCA, HNSC, KIRP, OV, and THCA, while positively correlated with TMB in SKCM. b Correlation between expression of KLF7 and MSI with the function “gene_MSI_radar("KLF7")”. KLF7 was negatively correlated with MSI in COAD, DLBC, HNSC, and STAD, while positively correlated with MSI in LUSC. *p < 0.05, **p < 0.01

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BMC Bioinformatics

ISSN: 1471-2105

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