Fig. 1
From: Predicting microbial interactions with approaches based on flux balance analysis: an evaluation
Overview of the tools used in the evaluation. Three tools were selected for the evaluation: MICOM with the cooperative tradeoff function and different OptCom versions, MMT simulatePairwiseinteractions function, and COMETS. The input parameters are further discussed in Table 3 in Methods. The “biomass maximization” panel represents the objective function maximization for all methods. For the OptCom implementation in MICOM, the original strategy of optimisation is shown