Table 1 Short read RNA-seq datasets accessed from the NCBI SRA database
From: ClusTrast: a short read de novo transcript isoform assembler guided by clustered contigs
SRA ID | RL | Species | RPs | |
|---|---|---|---|---|
SRR5133163.1 | \(2 \times 150\) | Human | 29.51 | 29.05 |
SRR8632985 | \(2 \times 76\) | Mouse | 31 | 30 |
SRR11341576 | \(2 \times 150\) | Rice | 24 | 23 |
SRR11278019 | \(2 \times 126\) | Arabidopsis | 11.2 | 11.1 |
SRR10728575 | \(2 \times 150\) | Zebrafish | 21 | 20 |
SRR5986240.1 | \(2 \times 150\) | Poplar | 25.1 | 24.4 |