Table 9 Comparison results of p value for detected SNPs by all methods using five traits
From: Multiple phenotype association tests based on sliced inverse regression
Method | Number of detected SNPs | SNP | p value |
|---|---|---|---|
SIR | 4 | kgp8001324 | 2.30e−02 |
rs405509 | 5.30e−03 | ||
rs769449 | 1.10e−03 | ||
rs445925 | 4.40e−02 | ||
PC1 | 1 | rs 8106922 | 3.00e−03 |
PC5 | 4 | rs394819 | 2.00e−03 |
rs405509 | 3.00e−03 | ||
rs769449 | 1.01e−04 | ||
kgp21335103 | 3.00e−03 | ||
PCFisher | 2 | rs769449 | 5.99e−04 |
kgp21335103 | 5.03e−04 | ||
PCLC | 1 | kgp8001324 | 7.31e−05 |
PCMin | 1 | kgp2187574 | 8.11e−04 |
VC | 1 | kgp8001324 | 2.00e−03 |
WI | 1 | kgp2187574 | 4.01e−04 |
Wald | 1 | kgp2187574 | 8.82e−04 |
PCAQ | 1 | rs769449 | 2.02e−04 |