Table 2 The number of motifs found by the five models on 180 human ATAC-seq datasets, along with the p value for the enrichment of the found motifs
From: MMGAT: a graph attention network framework for ATAC-seq motifs finding
Models | scFAN | FactorNet | MMGraph | MMGraph + GAT | MMGAT |
|---|---|---|---|---|---|
Motifs number | 348 | 256 | 374 | 383 | 389 |
\(-{{\text{log}}}_{10}\left(p\_value\right)\) | 3.854 | 3.759 | 6.768 | 7.085 | 7.271 |