Fig. 2
From: OrthoRefine: automated enhancement of prior ortholog identification via synteny
Benchmarking results for OrthoFinder and OrthoRefine on the Quest for Orthologs bacterial dataset. OrthoRefine was run with different parameters for window size (ws) and synteny ratio (sr). A Robinson-Foulds (RF) distance as a measure of specificity (lower values indicate higher specificity). B Average Schlicker scores for gene ontology (GO) and C enzyme classification (EC) as a measure of functional ortholog identification (higher scores indicate improvement)