Fig. 4
From: OrthoRefine: automated enhancement of prior ortholog identification via synteny
Synteny analysis of HOG 19. Matched colored circles represent genes assigned to the same HOG by OrthoFinder, with the HOG numbers shown below each circle; white circles denote genes with orthologs in other genomes located outside the displayed window. Green and blue boxes mark the two SOGs delineated by OrthoRefine. The missing data from E. marmotae to the right of the HOG19 member is due to a scaffold boundary in the assembly. The neighborhoods for genes marked by the blue box are identical and have been collapsed into a single line. The other members of HOG19 (b4106, b4096, HVX45_RS02390, HVX45_RS04025, & HVX45_RS09410) are omitted because they have no syntenic matches to any other member of HOG19