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Table 4 Synteny ratio between genes for HOG 346

From: OrthoRefine: automated enhancement of prior ortholog identification via synteny

Genius species

Locus tag

Synteny ratio

E. coli

S. enterica

Pseudomonas aeruginosa

b1916

STM1950

AFI95_RS32400

AFI95_RS29375

AFI95_RS07465

AFI95_RS28195

E. coli

b1916

0.22

0.00

0.00

0.00

S. enterica

STM1950

0.9

0.33

0.03

0.00

0.00

K. pneumoniae

N559_RS09495

0.86

0.83

0.00

0.00

0.00

0.00

  1. The four Gammaproteobacteria genomes were analyzed with OrthoRefine (window size = 30; synteny ratio = 0.2)