Category | All | Outlierness < 2.0 | No. of reference sequences | ||
---|---|---|---|---|---|
 | Total | % acc.* | Total | % acc.* |  |
(a) by gene segment | |||||
Gag | 14,915 | 97.85 | 14,570 | 98.65 | 1,142 |
pol | 64,607 | 98.67 | 61,704 | 99.20 | 735 |
vif | 1,330 | 99.62 | 1,324 | 100.00 | 945 |
vpr | 1,713 | 99.71 | 1,702 | 99.71 | 810 |
tat | 1,987 | 99.35 | 1,976 | 99.44 | 659 |
env | 63,519 | 99.17 | 62,652 | 99.52 | 1,175 |
nef | 5,598 | 99.59 | 5,572 | 99.82 | 1,559 |
(b) by subtype | |||||
A | 11,907 | 95.44 | 11,317 | 97.74 | 259 |
B | 112,997 | 99.53 | 111,396 | 99.64 | 1,750 |
C | 12,785 | 99.1 | 12,586 | 99.52 | 908 |
D | 3,743 | 95.99 | 3,526 | 98.24 | 158 |
F | 1,321 | 96.14 | 939 | 97.12 | 37 |
G | 2,379 | 94.33 | 1,800 | 95.89 | 65 |
H | 214 | 71.03 | 47 | 51.06 | 11 |
J | 124 | 54.84 | 15 | 0 | 3 |
K | 39 | 69.23 | 11 | 54.55 | 3 |
01_AE | 8,160 | 98.80 | 7,863 | 98.93 | 152 |
Total | 153,669 | 98.86 | 149,500 | 99.32 | 3,346 |