Method | Description |
---|---|
clear | Clears a resource from RAM. |
clearall | Clears all resources from RAM. |
dumpOff | Switches dumping OFF. |
dumpOn | Switches dumping ON. |
export | Exports the graph to a pdf file, including docstrings. |
getinputs | Collects all input resources that are input to the given node and returns a copy of them in a list. |
list | Lists the state (unavailable / dumped / to be built) of all resources. |
provide | Provides a resource. The resource is returned if available, loaded from disk if dumped, built on the fly otherwise. |
publish | Exports the analysis as an HTML bioinformatic protocol. |
rebuild | Clears a resource, then provides it. |
run | Provides all leaf (final) resources. |
trust | Assigns a resource to a node without invalidating dependent resources. |
undump | Clears a dumped resource from the disk. |
undumpall | Clears all dumped resources from the disk. |
untrust | Clears a resource and all its dependent. |