Freimer NB, Sabatti C: Human genetics: variants in common diseases. Nature. 2007, 445 (7130): 828-830. 10.1038/nature05568.
Article
PubMed
CAS
Google Scholar
Ward LD, Kellis M: Interpreting noncoding genetic variation in complex traits and human disease. Nat Biotechnol. 2012, 30 (11): 1095-1106. 10.1038/nbt.2422.
Article
PubMed Central
PubMed
CAS
Google Scholar
Pasmant E, Sabbagh A, Vidaud M, Bieche I: ANRIL, a long, noncoding RNA, is an unexpected major hotspot in GWAS. Faseb J. 2010, 25 (2): 444-448.
Article
PubMed
Google Scholar
Ponting CP, Oliver PL, Reik W: Evolution and functions of long noncoding RNAs. Cell. 2009, 136 (4): 629-641. 10.1016/j.cell.2009.02.006.
Article
PubMed
CAS
Google Scholar
Wilusz JE, Sunwoo H, Spector DL: Long noncoding RNAs: functional surprises from the RNA world. Genes Dev. 2009, 23 (13): 1494-1504. 10.1101/gad.1800909.
Article
PubMed Central
PubMed
CAS
Google Scholar
Tsai MC, Spitale RC, Chang HY: Long intergenic noncoding RNAs: new links in cancer progression. Cancer Res. 2011, 71 (1): 3-7. 10.1158/0008-5472.CAN-10-2483.
Article
PubMed Central
PubMed
CAS
Google Scholar
Wapinski O, Chang HY: Long noncoding RNAs and human disease. Trends Cell Biol. 2011, 21 (6): 354-361. 10.1016/j.tcb.2011.04.001.
Article
PubMed
CAS
Google Scholar
Sethupathy P, Collins FS: MicroRNA target site polymorphisms and human disease. Trends Genet. 2008, 24 (10): 489-497. 10.1016/j.tig.2008.07.004.
Article
PubMed
CAS
Google Scholar
Ryan BM, Robles AI, Harris CC: Genetic variation in microRNA networks: the implications for cancer research. Nat Rev Cancer. 2010, 10 (6): 389-402. 10.1038/nrc2867.
Article
PubMed Central
PubMed
CAS
Google Scholar
Bartel DP: MicroRNAs: target recognition and regulatory functions. Cell. 2009, 136 (2): 215-233. 10.1016/j.cell.2009.01.002.
Article
PubMed Central
PubMed
CAS
Google Scholar
Hu Z, Bruno AE: The influence of 3’UTRs on MicroRNA function inferred from human SNP data. Comp Funct Genom. 2011, 2011: 910769-
Article
Google Scholar
Saunders MA, Liang H, Li WH: Human polymorphism at microRNAs and microRNA target sites. Proc Natl Acad Sci U S A. 2007, 104 (9): 3300-3305. 10.1073/pnas.0611347104.
Article
PubMed Central
PubMed
CAS
Google Scholar
Jendrzejewski J, He H, Radomska HS, Li W, Tomsic J, Liyanarachchi S, Davuluri RV, Nagy R, de la Chapelle A: The polymorphism rs944289 predisposes to papillary thyroid carcinoma through a large intergenic noncoding RNA gene of tumor suppressor type. Proc Natl Acad Sci U S A. 2012, 109 (22): 8646-8651. 10.1073/pnas.1205654109.
Article
PubMed Central
PubMed
CAS
Google Scholar
Jin G, Sun J, Isaacs SD, Wiley KE, Kim ST, Chu LW, Zhang Z, Zhao H, Zheng SL, Isaacs WB, Xu J: Human polymorphisms at long non-coding RNAs (lncRNAs) and association with prostate cancer risk. Carcinogenesis. 2011, 32 (11): 1655-1659. 10.1093/carcin/bgr187.
Article
PubMed Central
PubMed
CAS
Google Scholar
Liu Y, Pan S, Liu L, Zhai X, Liu J, Wen J, Zhang Y, Chen J, Shen H, Hu Z: A genetic variant in long non-coding RNA HULC contributes to risk of HBV-related hepatocellular carcinoma in a Chinese population. PLoS One. 2012, 7 (4): e35145-10.1371/journal.pone.0035145.
Article
PubMed Central
PubMed
CAS
Google Scholar
Kumar V, Westra HJ, Karjalainen J, Zhernakova DV, Esko T, Hrdlickova B, Almeida R, Zhernakova A, Reinmaa E, Vosa U, Hofker MH, Fehrmann RS, Fu J, Withoff S, Metspalu A, Franke L, Wijmenga C: Human disease-associated genetic variation impacts large intergenic non-coding RNA expression. PLoS Genet. 2013, 9 (1): e1003201-10.1371/journal.pgen.1003201.
Article
PubMed Central
PubMed
CAS
Google Scholar
Cunnington MS, Santibanez Koref M, Mayosi BM, Burn J, Keavney B: Chromosome 9p21 SNPs associated with multiple disease phenotypes correlate with ANRIL expression. PLoS Genet. 2010, 6 (4): e1000899-10.1371/journal.pgen.1000899.
Article
PubMed Central
PubMed
Google Scholar
Mailman MD, Feolo M, Jin Y, Kimura M, Tryka K, Bagoutdinov R, Hao L, Kiang A, Paschall J, Phan L, Popova N, Pretel S, Ziyabari L, Lee M, Shao Y, Wang ZY, Sirotkin K, Ward M, Kholodov M, Zbicz K, Beck J, Kimelman M, Shevelev S, Preuss D, Yaschenko E, Graeff A, Ostell J, Sherry ST: The NCBI dbGaP database of genotypes and phenotypes. Nat Genet. 2007, 39 (10): 1181-1186.
Article
PubMed Central
PubMed
CAS
Google Scholar
Becker KG, Barnes KC, Bright TJ, Wang SA: The genetic association database. Nat Genet. 2004, 36 (5): 431-432. 10.1038/ng0504-431.
Article
PubMed
CAS
Google Scholar
Thorisson GA, Lancaster O, Free RC, Hastings RK, Sarmah P, Dash D, Brahmachari SK, Brookes AJ: HGVbaseG2P: a central genetic association database. Nucleic Acids Res. 2009, 37 (Database issue): D797-D802.
Article
PubMed Central
PubMed
CAS
Google Scholar
Johnson AD, O’Donnell CJ: An open access database of genome-wide association results. BMC Med Genet. 2009, 10: 6-
Article
PubMed Central
PubMed
Google Scholar
Hindorff LA, Sethupathy P, Junkins HA, Ramos EM, Mehta JP, Collins FS, Manolio TA: Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Proc Natl Acad Sci U S A. 2009, 106 (23): 9362-9367. 10.1073/pnas.0903103106.
Article
PubMed Central
PubMed
CAS
Google Scholar
Altman RB: PharmGKB: a logical home for knowledge relating genotype to drug response phenotype. Nat Genet. 2007, 39 (4): 426-10.1038/ng0407-426.
Article
PubMed Central
PubMed
CAS
Google Scholar
C WTCC: Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature. 2007, 447 (7145): 661-678. 10.1038/nature05911.
Article
Google Scholar
Begum F, Ghosh D, Tseng GC, Feingold E: Comprehensive literature review and statistical considerations for GWAS meta-analysis. Nucleic Acids Res. 2012, 40 (9): 3777-3784. 10.1093/nar/gkr1255.
Article
PubMed Central
PubMed
CAS
Google Scholar
Chen G, Wang Z, Wang D, Qiu C, Liu M, Chen X, Zhang Q, Yan G, Cui Q: LncRNADisease: a database for long-non-coding RNA-associated diseases. Nucleic Acids Res. 2013, 41 (Database issue): D983-D986.
Article
PubMed Central
PubMed
CAS
Google Scholar
Yang JH, Li JH, Jiang S, Zhou H, Qu LH: ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data. Nucleic Acids Res. 2013, 41 (Database issue): D177-D187.
Article
PubMed Central
PubMed
CAS
Google Scholar
Ziebarth JD, Bhattacharya A, Chen A, Cui Y: PolymiRTS Database 2.0: linking polymorphisms in microRNA target sites with human diseases and complex traits. Nucleic Acids Res. 2012, 40 (Database issue): D216-D221.
Article
PubMed Central
PubMed
CAS
Google Scholar
Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabasi AL: The human disease network. Proc Natl Acad Sci U S A. 2007, 104 (21): 8685-8690. 10.1073/pnas.0701361104.
Article
PubMed Central
PubMed
CAS
Google Scholar
Eeles RA, Kote-Jarai Z, Giles GG, Olama AA, Guy M, Jugurnauth SK, Mulholland S, Leongamornlert DA, Edwards SM, Morrison J, Field HI, Southey MC, Severi G, Donovan JL, Hamdy FC, Dearnaley DP, Muir KR, Smith C, Bagnato M, Ardern-Jones AT, Hall AL, O'Brien LT, Gehr-Swain BN, Wilkinson RA, Cox A, Lewis S, Brown PM, Jhavar SG, Tymrakiewicz M, Lophatananon A, et al: Multiple newly identified loci associated with prostate cancer susceptibility. Nat Genet. 2008, 40 (3): 316-321. 10.1038/ng.90.
Article
PubMed
CAS
Google Scholar
Prensner JR, Iyer MK, Balbin OA, Dhanasekaran SM, Cao Q, Brenner JC, Laxman B, Asangani IA, Grasso CS, Kominsky HD, Cao X, Jing X, Wang X, Siddiqui J, Wei JT, Robinson D, Iyer HK, Palanisamy N, Maher CA, Chinnaiyan AM: Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression. Nat Biotechnol. 2011, 29 (8): 742-749. 10.1038/nbt.1914.
Article
PubMed Central
PubMed
CAS
Google Scholar