Skip to main content

Table 1 Gene expression data analyzed in this work

From: Inferring the perturbed microRNA regulatory networks from gene expression data using a network propagation based method

Dataset Cell miRNA Treatment Sample
GSE33420 CRC (DLD-1) miR-143 Overexpression 4 case + 4ctrl
GSE18625 CRC (DLD-1) miR-145 Overexpression 4 case + 3ctrl
GSE7754 CRC (HCT116) miR-34a Overexpression 2 case + 2ctrl
GSE16568 OVCA (ES-2) miR-22 Overexpression 3 case + 3ctrl
GSE16569 OVCA (OVSAYO) miR-30a/30d Knockdown 3 case + 3ctrl
GSE16572 OVCA (ES-2) miR-182 Knockdown 3 case + 3ctrl
GSE6207 HCC (HepG2) miR-124 Overexpression Case-ctrl, time-course (4 h, 8 h, 16 h, 24 h, 32 h, 72 h, 120 h)
GSE4107 Colonic mucosa NA NA 12 cancer + 10 normal