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Figure 11 | BMC Bioinformatics

Figure 11

From: Genome alignment with graph data structures: a comparison

Figure 11

Palindromes and tandem repeats are not distinguishable in the structure of alignment and A-Bruijn graphs. Depending on the relative orientation of the segments in block A, the displayed alignment graph structure and A-Bruijn graph structure represents a palindrome or a tandem repeat. In Enredo graphs, palindromes and tandem repeats form distinct substructures.

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