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Table 2 Statistics of factor binding sites for the set of 146 modules predicted by Ahab.

From: Computational detection of genomic cis- regulatory modules applied to body patterning in the early Drosophila embryo

  bcd cd dl hb kni Kr tll torRE
sites 179 99 143 213 302 203 597 24
specific 3.3 3.3 3.6 3.4 2.6 3.6 2.8 4.3
modules 65 35 62 72 84 76 119 4
  1. The specificity is defined as a standard error, eg 3 (4) implies a 0.14% (0.003%) probability of getting a match as good as the median data match from random sequence.
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BMC Bioinformatics

ISSN: 1471-2105

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