Table 2 Types of mapping between SCOP and Pfam families.
From: Comparative mapping of sequence-based and structure-based protein domains
Type of map | Example | |
|---|---|---|
| Â | SCOP | Pfam |
One SCOP domain family to exactly one Pfam family | b.81.2.1 | CfAFP |
One SCOP domain family to a series of Pfam families | e.38.1.1 | {PCRF, RF-1} |
A series of SCOP domain families to one Pfam family | {d.179.1.1, d.58.20.1} | HMG-CoA_red |
A SCOP domain family to several sets of Pfam families | b.41.1.1 | {PRCH, PRC}; PRC |
Sets of SCOP domain families to one Pfam family | {f.10.1.1, b.1.18.4}; i.6.1.1 | Alpha_E1_glycop |