Figure 4

Distribution of sequence pair z scores for 5S rRNA, tRNA, and negative sequences. Distribution of z scores computed using the Dynalign ΔG°total and the columnwise shuffle control method (M = 8) for 5S rRNA sequence pairs and negatives generated from them (left figure) and tRNA sequence pairs and negatives generated from them (right figure). Real ncRNA are white, negatives are black. Test set is the same as for Figure 3.