Table 5 Detection of long ncRNAs using scanning windows.
| Â | percent identity of entire alignment | total number of scanning windows | number of scanning windows with P> 0.5 | number of scanning windows with P> 0.9 | number of scanning windows with P> 0.99 |
|---|---|---|---|---|---|
16S rRNA | |||||
Borrelia burgdorferi and Bacillus subtilis | 74.5% | 30 | 17 | 12 | 6 |
Homo sapiens (mitochondrial) and Thermotoga maritima | 39.3% | 30 | 1 | 1 | 0 |
Archaeoglobus fulgidus and Borrelia burgdorferi | 61.8% | 30 | 22 | 17 | 14 |
23S rRNA | |||||
Escherichia coli and Thermoplasma acidophilum | 59.4% | 57 | 49 | 41 | 37 |
Bacillus subtilis and Bos taurus | 37.1% | 57 | 35 | 26 | 21 |
Bacillus subtilis and Thermoproteus tenax | 60.1% | 61 | 3 | 2 | 1 |