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Table 5 List of primary rat beta-cell genes predicted as NF-κB targets in both rat and a primate species (top 30 genes).

From: In silico identification of NF-kappaB-regulated genes in pancreatic beta-cells

Ensembl gene ID

Gene description

Prob.

Human

Mouse

Chimpanzee

ENSRNOG00000011023

Nitric oxide synthase, inducible

0.999999

NF-κB

NF-κB

NF-κB

ENSRNOG00000022256

Small inducible cytokine B10 precursor

0.999988

NF-κB

NF-κB

NF-κB

ENSRNOG00000014297

Syndecan-4 precursor

0.999814

NF-κB

NF-κB

NF-κB

ENSRNOG00000012180

RAB5A, member RAS oncogene family

0.999691

NF-κB

NF-κB

NF-κB

ENSRNOG00000020102

sirtuin

0.999613

NF-κB

NF-κB

NF-κB

ENSRNOG00000002792

Macrophage inflammatory protein 2 precursor

0.999578

NF-κB

NF-κB

NF-κB

ENSRNOG00000021130

Sulfonylurea receptor 1

0.999543

NF-κB

NF-κB

CTL

ENSRNOG00000021156

PREDICTED: vascular endothelial growth factor B

0.999392

NF-κB

NF-κB

NF-κB

ENSRNOG00000007390

NF-κB inhibitor alpha

0.999265

NF-κB

NF-κB

NF-κB

ENSRNOG00000013412

cAMP response element binding protein

0.999217

NF-κB

NF-κB

NF-κB

ENSRNOG00000002843

Small inducible cytokine B5 precursor

0.999081

NF-κB

NF-κB

NF-κB

ENSRNOG00000008217

Mucosal addressing cell adhesion molecule 1 precursor

0.998906

NF-κB

NF-κB

NA

ENSRNOG00000020481

Platelet-activating factor acetylhydrolase IB gamma subunit

0.998769

NF-κB

NF-κB

NF-κB

ENSRNOG00000031090

RT1 class I, CE7

0.99778

NF-κB

NF-κB

NF-κB

ENSRNOG00000000723

RT1 class I, CE5 isoform 2

0.99716

NF-κB

NF-κB

NF-κB

ENSRNOG00000011559

Calponin-3

0.996972

NF-κB

NF-κB

NF-κB

ENSRNOG00000000468

RT1 class I, A3

0.996707

NF-κB

CTL

NF-κB

ENSRNOG00000030251

RT1-CE10 protein

0.996647

NF-κB

NF-κB

NF-κB

ENSRNOG00000030712

RT1 class Ia, locus A1

0.996479

NF-κB

NF-κB

NF-κB

ENSRNOG00000005438

Neuroendocrine convertase 2 precursor

0.995956

NF-κB

NF-κB

NF-κB

ENSRNOG00000032707

Pro-epidermal growth factor precursor

0.993999

NF-κB

NF-κB

NF-κB

ENSRNOG00000016346

Protein kinase C, delta type

0.9938

NF-κB

NF-κB

CTL

ENSRNOG00000006268

Interferon beta precursor

0.99279

NF-κB

NF-κB

NF-κB

ENSRNOG00000016630

Tln_predicted protein.

0.989963

NF-κB

CTL

NF-κB

ENSRNOG00000019080

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7

0.987715

NF-κB

NF-κB

NF-κB

ENSRNOG00000031607

RT1 class I, CE4

0.986733

NF-κB

CTL

NF-κB

ENSRNOG00000004148

Serine/threonine-protein kinase PCTAIRE-2

0.98582

CTL

NF-κB

NF-κB

ENSRNOG00000028387

START domain containing 3

0.985143

NF-κB

CTL

NA

ENSRNOG00000003743

Aspartyl-tRNA synthetase

0.984986

NF-κB

CTL

CTL

ENSRNOG00000016588

myeloid-associated differentiation marker

0.983779

NF-κB

NA

NF-κB

  1. Known NF-κB target genes are in bold; Prob.: Posterior probability for NF-κB regulation; NF-κB: the homolog gene is predicted as an NF-κB target; CTL: the homolog gene is predicted as a non NF-κB target; NA: upstream sequence of the homolog gene not available.