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Table 4 Simulation Results for the Independent Models

From: Gene selection with multiple ordering criteria

   

FDR

Power

n

m 1

δ

P-val

P-adm

Convex

Pareto

P-val

P-adm

Convex

Pareto

10

50

1.0

5.4

3.7

3.4

3.4

2.1

2.8

2.8

2.9

  

1.2

5.4

3.3

3.0

2.8

7.0

8.3

8.3

8.7

  

1.4

5.1

3.0

2.9

2.7

20.8

22.5

23.0

24.0

  

1.6

5.0

3.0

3.0

2.9

40.4

42.2

43.2

44.3

  

1.8

4.7

2.8

2.8

2.8

62.1

64.2

65.2

65.8

  

2.0

4.9

2.9

3.1

3.1

77.9

80.3

81.2

81.9

  

2.5

5.1

4.6

4.6

5.1

96.4

97.9

98.0

98.2

  

3.0

5.0

5.1

5.1

5.2

99.7

100.0

100.0

100.0

 

100

1.0

5.0

2.9

2.8

2.5

3.3

3.9

4.0

4.2

  

1.2

5.2

3.0

3.3

3.1

13.9

14.9

15.2

15.8

  

1.4

4.7

2.7

2.9

2.8

34.4

35.7

36.2

36.9

  

1.6

4.5

2.7

2.9

2.8

56.1

57.7

58.4

59.1

  

1.8

4.5

2.8

3.0

2.8

74.5

76.3

76.9

77.5

  

2.0

4.7

3.0

3.3

2.8

87.0

88.9

89.2

89.6

  

2.5

4.8

4.3

4.5

4.9

98.3

99.2

99.3

99.3

  

3.0

4.6

5.1

5.1

5.2

99.9

100.0

100.0

100.0

15

50

1.0

4.2

3.1

3.3

3.1

13.6

15.0

15.1

15.7

  

1.2

4.6

3.1

3.2

3.3

37.4

38.9

39.7

40.6

  

1.4

4.8

3.3

3.5

3.5

63.5

65.5

66.2

66.8

  

1.6

4.9

3.6

3.8

4.0

82.8

84.6

85.2

85.7

  

1.8

4.9

4.2

4.3

4.9

93.3

94.7

95.1

95.2

  

2.0

4.7

4.8

4.9

5.1

97.7

98.6

98.7

98.7

  

2.5

4.5

5.0

4.9

5.1

99.9

100.0

100.0

100.0

  

3.0

4.7

5.1

5.0

5.2

100.0

100.0

100.0

100.0

15

100

1.0

4.7

3.1

3.2

3.1

22.3

23.2

23.6

24.2

  

1.2

4.6

3.1

3.3

3.3

50.0

51.2

51.8

52.4

  

1.4

4.6

3.3

3.5

3.6

74.2

75.7

76.2

76.7

  

1.6

4.5

3.4

3.7

3.8

89.0

90.3

90.7

90.9

  

1.8

4.5

3.9

4.1

4.3

96.0

97.1

97.2

97.3

  

2.0

4.5

4.5

4.6

4.9

98.8

99.3

99.4

99.4

  

2.5

4.6

5.0

5.1

5.2

100.0

100.0

100.0

100.0

  

3.0

4.5

5.1

5.0

5.2

100.0

100.0

100.0

100.0

  1. The average FDR and power estimates from 500 simulations at the FDR level of 5%. The same number of genes is selected using the Benjamini and Hochberg procedure from the p-value ranking at FDR = 5%. All values are in percentages.