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Table 2 False Discovery and True Positive Rates under changing chromatography conditions

From: LC-MSsim – a simulation software for liquid chromatography mass spectrometry data

condition

 

Superhirn

msInspect

OpenMS

MZmine

SpecArray

Decon2LS

good

TPR/FDR

0.98/0.87

0.97/0.85

0.85/0.20

0.85/0.19

0.98/0.05

0.72/0.38

medium

TPR/FDR

0.99/0.87

0.98/0.84

0.92/0.23

0.92/0.28

0.99/0.05

0.81/0.64

poor

TPR/FDR

0.98/0.86

0.98/0.84

0.92/0.16

0.91/0.20

0.99/0.05

0.79/0.48

  1. False Discovery and True Positive Rates on three data sets under changing chromatography conditions.
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BMC Bioinformatics

ISSN: 1471-2105

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