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Table 1 MAUVE parameter setup using the collinear genomes of E. coli MG1655 and Sakai strains.

From: MOSAIC: an online database dedicated to the comparative genomics of bacterial strains at the intra-species level

a
  MGA MAUVE
Min_rec_gap_length   200 (default) 1000 5000 10000    
Number of backbone segments with a length ≤30 bp 37 588 242 93 45    
Total number of backbone segments 617 1363 959 782 717    
b
  MGA MAUVE
Weight   57 (default) 500 1000 2000 3000 5000 10000
Number of LCB 1 113 47 25 10 4 4 1
  1. Table 1a – Effect of the minimal_recursive_gap_length (Min_rec_gap_length) on backbone fragmentation (seed = 19 and weight=default). Table 1b – Effect of weight on the number of LCBs (min_rec_gap_len = 5000 and seed = 19).