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Figure 6 | BMC Bioinformatics

Figure 6

From: New challenges for text mining: mapping between text and manually curated pathways

Figure 6

NF-kB pathway full-text version. The NF-kB pathway full-text version, bigger than GENIA version, has 28 entities and 17 reactions. The additional reactions are as follows: R11: binding between PKAc and Complex(NF-kB/IkBa), R12: phosphorylation of IKK Complex by TAK1, R13:phosphorylation of IKKb Serine cluster, R14: degradation of IkBa by 26S proteasome + dissociation of PKAc from NF-kB + NF-kB phosphorylation by PKAc occur almost at the same time, R15: shattling of IkBa between cytosol and nucleus, R16: dissociation of Complex(NF-kB/kB site) by IkBa, R17: binding between NF-kB and IkBa in the nucleus, R18: translocation of Complex(NF-kB/IkBa) from nucleus to the cytosol.

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