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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Odintifier - A computational method for identifying insertions of organellar origin from modern and ancient high-throughput sequencing data based on haplotype phasing

Fig. 2

Bugle phased block. Sequence similarity dendrogram of the reconstructed sequences from the region on the plastid genome identified to contain odin-derived reads. The reconstructed plastid sequence (i.e. the organellar genome region source of the odin) is shown in a non-quantitative green gradient according to the similarity to the plastid reference (NC_023102.1), the reference mitochondrial region host of the odin is shown in red (NC_023103.1), and the reconstructed odin mtpt is shown in orange. The MC and 2/3 methods are not able to simultaneously reconstruct the odin sequence using only a chloroplast reference sequence, thus the missing MC and 2/3 mtpt branches in the dendrogram

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