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Table 3 List of Double Indirect s. miRNA STPs obtained with CyTRANSFINDER using human miR-146a as the source intergenic miRNA, targets according to TargetScan 5.1 as destination genes and miRNA targets confirmed in at least two of the source databases

From: CyTRANSFINDER: a Cytoscape 3.3 plugin for three-component (TF, gene, miRNA) signal transduction pathway construction

SmiRNA References TF References TF target (Gene) ImiRNA DG
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 MLL2
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 C10ORF76
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 PBX2
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 NF2
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 NPAS4
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 HIC2
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 LRTOMT
has-miR-146a [37, 5052] SMAD4 [39] POR has-miR-4651 VAT1
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 GOSR1
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 SLC2A3
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 RNF4
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 SCN3B
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 GALNT10
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 MMP16
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 IER5L
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 GNL1
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 KIAA1274
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 KPNA6
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 NFASC
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 GGA2
has-miR-146a [53] BRCA1 [40, 54, 55] CYP19A1 has-miR-4713 ADARB1
  1. SmiRNA: Source intergenic miRNA; TF: Transcription Factor; TF target (Gene): Transcription Factor target gene, which is also the host gene for a miRNA; ImiRNA: miRNA located inside the TF target gene; DG: Destination Gene; Reference: data available from literature