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Table 1 All used species and their genome accession numbers

From: A method for identification of highly conserved elements and evolutionary analysis of superphylum Alveolata

Organism Source Accession
Coccidia (apicomplexans)
Cyclospora cayetanensis strain CHN_HEN01 GenBank GCA_000769155.1
Eimeria falciformis Bayer Haberkorn 1970 EuPathDB ToxoDB 26
Hammondia hammondi strain H.H.34 GenBank GCA_000258005.2
Neospora caninum Liverpool GenBank GCA_000208865.2
Sarcocystis neurona SN3 GenBank GCA_000727475.1
Toxoplasma gondii ME49 GenBank GCA_000006565.2
Plasmodium (apicomplexans)
Plasmodium berghei ANKA EuPathDB PlasmoDB 25
Plasmodium chabaudi chabaudi GenBank GCA_000003075.2
Plasmodium falciparum 3D7 GenBank GCA_000002765.1
Plasmodium yoelii yoelii YM EuPathDB PlasmoDB 25
Piroplasmida (apicomplexans)
Babesia bovis strain T2Bo GenBank GCA_000165395.1
Babesia microti strain RI GenBank GCA_000691945.1
Theileria annulata strain Ankara GenBank GCA_000003225.1
Theileria equi strain WA GenBank GCA_000342415.1
Theileria orientalis strain Shintoku GenBank GCA_000740895.1
Theileria parva strain Muguga GenBank GCA_000165365.1
Cryptosporidium (apicomplexans)
Cryptosporidium baileyi TAMU-09Q1 EuPathDB CryptoDB 26
Cryptosporidium hominis TU502 GenBank GCA_000006425.2
Cryptosporidium meleagridis UKMEL1 EuPathDB CryptoDB 26
Cryptosporidium muris RN66 GenBank GCA_000006515.1
Cryptosporidium parvum Iowa II GenBank GCA_000165345.1
Other apicomplexans
Gregarina niphandrodes GenBank GCA_000223845.4
Ascogregarina taiwanensis GenBank GCA_000172235.1
Chromerida (alveolata)
Chromera velia CCMP2878 EuPathDB CryptoDB 26
Vitrella brassicaformis CCMP3155 GenBank GCA_001179505.1
Perkinsida (alveolata)
Perkinsus marinus ATCC 50983 GenBank GCA_000006405.1
Ciliophora (ciliates)
Tetrahymena thermophila SB210 GenBank GCA_000189635.1
Paramecium tetraurelia strain d4-2 GenBank GCA_000165425.1
Ichthyophthirius multifiliis strain G5 GenBank GCA_000220395.1
Stylonychia lemnae 2x8/2 GenBank GCA_000325865.2