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Table 4 Mean precision for long-range contacts for proteins from D329, SVMcon Test, PSICOV and EPC-map_test

From: EPSILON-CP: using deep learning to combine information from multiple sources for protein contact prediction

 

L/10

L/5

L/2

L

1.5L

EPC-map

0.656

0.591

0.459

0.335

0.263

MetaPSCIOV (stage 1)

0.639

0.57

0.444

0.333

0.268

MetaPSCIOV (stage 2)

0.658

0.599

0.483

0.368

0.3

EPSILON-CP

0.723

0.665

0.542

0.409

0.325

CCMpred

0.511

0.456

0.345

0.249

0.197

GaussDCA

0.481

0.423

0.322

0.238

0.192

GREMLIN

0.5

0.448

0.338

0.243

0.192

PSICOV

0.452

0.39

0.285

0.203

0.163

  1. Precision of the top predictions relative to the sequence length L
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BMC Bioinformatics

ISSN: 1471-2105

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