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Table 1 Clustered graph metrics

From: A proximity-based graph clustering method for the identification and application of transcription factor clusters

  ChIP-seq ENCODE-motif
FPR 0.1 0.01 0.001 0.0001 0.1 0.01 0.001 0.0001
Nodes 111 585
Edges Filtered 3032 3429 3973 4349 132141 146638 155684 160755
Pct. Edges Filtered 48.8 55.2 63.9 69.6 77.1 85.6 90.8 93.8
Clusters 10 11 10 12 51 52 54 51
Med. Nodes per Cluster 6 6 4.5 6 5 5 5 4
Max. Nodes per Cluster 36 25 37 25 135 143 129 139
Unclustered Pct. 18.0 13.5 13.5 15.3 0 0.342 1.19 3.42