HGT-ID: an efficient and sensitive workflow to detect human-viral insertion sites using next-generation sequencing data

Table 1 Sample sets that were used to validate the performance of HGT-ID

Sample Set	Possible Virus	Data type	No. of Samples	Ref
1. Cervical cell lines and cervical carcinoma	Human papillomavirus	WGS	4 WGS	[28]
2. Hepatocellular carcinoma	Hepatitis B virus	WGS	13 WGS	[10]
3. TCGA Breast invasive carcinoma	NA	WGS	220 WGS	[29]
4. Hepatocellular carcinoma	Hepatitis B virus	WGS + RNA-Seq	7 WGS + 7 RNA-Seq	https://cancergenome.nih.gov/

ISSN: 1471-2105